IL_6QNQ_337
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGG*CACAC
- Length
- 9 nucleotides
- Bulged bases
- 6QNQ|1|13|A|1227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNQ_337 not in the Motif Atlas
- Geometric match to IL_4WF9_124
- Geometric discrepancy: 0.3243
- The information below is about IL_4WF9_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13404.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
6QNQ|1|13|G|951
6QNQ|1|13|U|952
6QNQ|1|13|G|953
6QNQ|1|13|G|954
*
6QNQ|1|13|C|1226
6QNQ|1|13|A|1227
6QNQ|1|13|C|1228
6QNQ|1|13|A|1229
6QNQ|1|13|C|1230
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1I
- 30S ribosomal protein S10
- Chain 1K
- Transfer RNA; tRNA
- Chain 2K
- Transfer RNA; tRNA
- Chain 4I
- 30S ribosomal protein S13
- Chain 8E
- 30S ribosomal protein S9
- Chain AI
- 30S ribosomal protein S19
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