IL_6QNQ_339

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAACCCGG*CUGGGGUGCCCCGCGAGGGGAGC

Length

31 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNQ|1|13|G|1003
6QNQ|1|13|A|1004
6QNQ|1|13|A|1005
6QNQ|1|13|C|1006
6QNQ|1|13|C|1007
6QNQ|1|13|C|1008
6QNQ|1|13|G|1009
6QNQ|1|13|G|1010
*
6QNQ|1|13|C|1019
6QNQ|1|13|U|1020
6QNQ|1|13|G|1021
6QNQ|1|13|G|1022
6QNQ|1|13|G|1023
6QNQ|1|13|G|1024
6QNQ|1|13|U|1025
6QNQ|1|13|G|1026
6QNQ|1|13|C|1027
6QNQ|1|13|C|1028
6QNQ|1|13|C|1028|||A
6QNQ|1|13|C|1028|||B
6QNQ|1|13|G|1029
6QNQ|1|13|C|1030
6QNQ|1|13|G|1031
6QNQ|1|13|A|1032
6QNQ|1|13|G|1032|||A
6QNQ|1|13|G|1032|||B
6QNQ|1|13|G|1033
6QNQ|1|13|G|1034
6QNQ|1|13|A|1035
6QNQ|1|13|G|1036
6QNQ|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA