3D structure

PDB id
6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome initiation complex (IC) with experimentally assigned potassium ions
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
UGCCGUGAGGUGUUG*CGCAA
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6QNQ|1|13|U|1073
6QNQ|1|13|G|1074
6QNQ|1|13|C|1075
6QNQ|1|13|C|1076
6QNQ|1|13|G|1077
6QNQ|1|13|U|1078
6QNQ|1|13|G|1079
6QNQ|1|13|A|1080
6QNQ|1|13|G|1081
6QNQ|1|13|G|1082
6QNQ|1|13|U|1083
6QNQ|1|13|G|1084
6QNQ|1|13|U|1085
6QNQ|1|13|U|1086
6QNQ|1|13|G|1087
*
6QNQ|1|13|C|1098
6QNQ|1|13|G|1099
6QNQ|1|13|C|1100
6QNQ|1|13|A|1101
6QNQ|1|13|A|1102

Current chains

Chain 13
16S ribosomal RNA

Nearby chains

Chain 1E
30S ribosomal protein S2
Chain 4E
30S ribosomal protein S5
Chain 7E
30S ribosomal protein S8

Coloring options:

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