IL_6QUL_030
3D structure
- PDB id
- 6QUL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGG*UACC
- Length
- 7 nucleotides
- Bulged bases
- 6QUL|1|A|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QUL_030 not in the Motif Atlas
- Geometric match to IL_1L9A_004
- Geometric discrepancy: 0.3487
- The information below is about IL_1L9A_004
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_85599.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
6QUL|1|A|G|879
6QUL|1|A|G|880
6QUL|1|A|G|881
*
6QUL|1|A|U|895
6QUL|1|A|A|896
6QUL|1|A|C|897
6QUL|1|A|C|898
Current chains
- Chain A
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: