IL_6QUL_088
3D structure
- PDB id
- 6QUL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QUL_088 not in the Motif Atlas
- Geometric match to IL_3OXE_003
- Geometric discrepancy: 0.1697
- The information below is about IL_3OXE_003
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
6QUL|1|A|U|2457
6QUL|1|A|G|2458
6QUL|1|A|A|2459
*
6QUL|1|A|U|2493
6QUL|1|A|G|2494
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L16
Coloring options: