IL_6QX9_008
3D structure
- PDB id
- 6QX9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human fully-assembled precatalytic spliceosome (pre-B complex).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GUG*CCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QX9_008 not in the Motif Atlas
- Homologous match to IL_5VSU_002
- Geometric discrepancy: 0.5076
- The information below is about IL_5VSU_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73028.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6QX9|1|4|G|12
6QX9|1|4|U|13
6QX9|1|4|G|14
*
6QX9|1|6|C|61
6QX9|1|6|C|62
6QX9|1|6|C|63
Current chains
- Chain 4
- U4 snRNA
- Chain 6
- U6 snRNA
Nearby chains
- Chain 4A
- U4/U6 small nuclear ribonucleoprotein Prp3
- Chain 5A
- Pre-mRNA-processing-splicing factor 8
- Chain K
- Serine/threonine-protein kinase PRP4 homolog
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