IL_6QZP_021

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6QZP|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|A|466
6QZP|1|L5|U|467
6QZP|1|L5|U|468
6QZP|1|L5|C|469
6QZP|1|L5|A|470
6QZP|1|L5|A|471
6QZP|1|L5|C|472
*
6QZP|1|L5|G|682
6QZP|1|L5|C|683
6QZP|1|L5|G|684
6QZP|1|L5|C|685
6QZP|1|L5|A|686
6QZP|1|L5|U|687
6QZP|1|L5|U|688
6QZP|1|L5|U|689

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28