IL_6QZP_024

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

6QZP|1|L5|C|501, 6QZP|1|L5|C|502, 6QZP|1|L5|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|G|491
6QZP|1|L5|U|492
6QZP|1|L5|G|493
6QZP|1|L5|U|494
6QZP|1|L5|C|495
6QZP|1|L5|G|496
6QZP|1|L5|G|497
6QZP|1|L5|C|498
6QZP|1|L5|G|499
6QZP|1|L5|G|500
6QZP|1|L5|C|501
6QZP|1|L5|C|502
6QZP|1|L5|C|503
6QZP|1|L5|G|504
6QZP|1|L5|G|505
*
6QZP|1|L5|U|653
6QZP|1|L5|C|654
6QZP|1|L5|C|655
6QZP|1|L5|C|656
6QZP|1|L5|C|657
6QZP|1|L5|C|658
6QZP|1|L5|G|659
6QZP|1|L5|A|660
6QZP|1|L5|C|661
6QZP|1|L5|C|662

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18