IL_6QZP_127

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

6QZP|1|L5|A|4488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|U|4468
6QZP|1|L5|U|4469
6QZP|1|L5|G|4470
*
6QZP|1|L5|C|4485
6QZP|1|L5|C|4486
6QZP|1|L5|A|4487
6QZP|1|L5|A|4488
6QZP|1|L5|G|4489

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LH

60S ribosomal protein L9

Chain LO

60S ribosomal protein L13a

Chain Lm

Ubiquitin-60S ribosomal protein L40