IL_6QZP_148

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACG*CUCGC

Length

11 nucleotides

Bulged bases

6QZP|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|G|4891
6QZP|1|L5|A|4892
6QZP|1|L5|A|4893
6QZP|1|L5|A|4894
6QZP|1|L5|C|4895
6QZP|1|L5|G|4896
*
6QZP|1|L5|C|4924
6QZP|1|L5|U|4925
6QZP|1|L5|C|4926
6QZP|1|L5|G|4927
6QZP|1|L5|C|4928

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a