IL_6QZP_154

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

6QZP|1|L5|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|U|5003
6QZP|1|L5|C|5004
6QZP|1|L5|G|5005
6QZP|1|L5|U|5006
6QZP|1|L5|A|5007
6QZP|1|L5|C|5008
6QZP|1|L5|G|5009
*
6QZP|1|L5|U|5039
6QZP|1|L5|U|5040
6QZP|1|L5|G|5041
6QZP|1|L5|A|5042
6QZP|1|L5|A|5043
6QZP|1|L5|A|5044

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31