IL_6QZP_193

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UACAG*CCUGUAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|S2|U|530
6QZP|1|S2|A|531
6QZP|1|S2|C|532
6QZP|1|S2|A|533
6QZP|1|S2|G|534
*
6QZP|1|S2|C|549
6QZP|1|S2|C|550
6QZP|1|S2|U|551
6QZP|1|S2|G|552
6QZP|1|S2|U|553
6QZP|1|S2|A|554
6QZP|1|S2|A|555

Current chains

Chain S2

18S rRNA (1740-MER)

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30