IL_6QZP_242

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

6QZP|1|S2|A|1580, 6QZP|1|S2|C|1581

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|S2|G|1550
6QZP|1|S2|U|1551
6QZP|1|S2|G|1552
6QZP|1|S2|C|1553
6QZP|1|S2|C|1554
6QZP|1|S2|U|1555
6QZP|1|S2|A|1556
6QZP|1|S2|C|1557
6QZP|1|S2|C|1558
*
6QZP|1|S2|G|1577
6QZP|1|S2|U|1578
6QZP|1|S2|A|1579
6QZP|1|S2|A|1580
6QZP|1|S2|C|1581
6QZP|1|S2|C|1582

Current chains

Chain S2

18S rRNA (1740-MER)

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29