IL_6QZP_286

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCAGUG*CUAGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|S2|U|222
6QZP|1|S2|C|223
6QZP|1|S2|A|224
6QZP|1|S2|G|225
6QZP|1|S2|U|287
6QZP|1|S2|G|288
*
6QZP|1|S2|C|295
6QZP|1|S2|U|296
6QZP|1|S2|A|297
6QZP|1|S2|G|298
6QZP|1|S2|A|299

Current chains

Chain S2

18S rRNA (1740-MER)

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11