IL_6QZP_289
3D structure
- PDB id
- 6QZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCGG*CUGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QZP_289 not in the Motif Atlas
- Homologous match to IL_8P9A_416
- Geometric discrepancy: 0.571
- The information below is about IL_8P9A_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QZP|1|S2|C|877
6QZP|1|S2|G|878
6QZP|1|S2|C|879
6QZP|1|S2|G|880
6QZP|1|S2|G|881
*
6QZP|1|S2|C|905
6QZP|1|S2|U|906
6QZP|1|S2|G|907
6QZP|1|S2|A|908
6QZP|1|S2|G|909
Current chains
- Chain S2
- 18S rRNA (1740-MER)
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
Coloring options: