IL_6R5Q_037

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

6R5Q|1|5|G|748, 6R5Q|1|5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|G|745
6R5Q|1|5|A|746
6R5Q|1|5|A|747
6R5Q|1|5|G|748
6R5Q|1|5|G|749
6R5Q|1|5|U|750
6R5Q|1|5|G|751
6R5Q|1|5|G|752
6R5Q|1|5|C|753
*
6R5Q|1|5|G|910
6R5Q|1|5|U|911
6R5Q|1|5|G|912
6R5Q|1|5|U|913
6R5Q|1|5|U|914
6R5Q|1|5|A|915
6R5Q|1|5|C|916
6R5Q|1|5|A|917
6R5Q|1|5|G|918
6R5Q|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

Ribosomal protein L14

Chain S

eL20