IL_6R5Q_154

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

6R5Q|1|5|C|4895, 6R5Q|1|5|U|4925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|G|4890
6R5Q|1|5|G|4891
6R5Q|1|5|A|4892
6R5Q|1|5|A|4893
6R5Q|1|5|A|4894
6R5Q|1|5|C|4895
6R5Q|1|5|G|4896
*
6R5Q|1|5|C|4924
6R5Q|1|5|U|4925
6R5Q|1|5|C|4926
6R5Q|1|5|G|4927
6R5Q|1|5|C|4928
6R5Q|1|5|C|4929

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain M

Ribosomal protein L14

Chain O

uL13