IL_6R5Q_182

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6R5Q|1|K|C|142, 6R5Q|1|K|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|K|G|130
6R5Q|1|K|U|140
6R5Q|1|K|A|141
6R5Q|1|K|C|142
6R5Q|1|K|U|143
6R5Q|1|K|U|144
*
6R5Q|1|K|A|175
6R5Q|1|K|U|176
6R5Q|1|K|G|177
6R5Q|1|K|C|178
6R5Q|1|K|C|179
6R5Q|1|K|G|180
6R5Q|1|K|A|181
6R5Q|1|K|C|182

Current chains

Chain K

18S ribosomal RNA

Nearby chains

Chain CC

40S ribosomal protein S8

Chain z

40S ribosomal protein S6