IL_6R5Q_270

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

6R5Q|1|5|G|1359, 6R5Q|1|5|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|C|1357
6R5Q|1|5|G|1358
6R5Q|1|5|G|1359
6R5Q|1|5|G|1360
6R5Q|1|5|G|1361
*
6R5Q|1|5|C|1376
6R5Q|1|5|G|1377
6R5Q|1|5|C|1378
6R5Q|1|5|C|1379
6R5Q|1|5|G|1380
6R5Q|1|5|U|1381
6R5Q|1|5|G|1382

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain L

60S ribosomal protein L13

Chain N

Ribosomal protein L15

Chain a

uL15