IL_6R5Q_279
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGCC*GAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R5Q_279 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.3102
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
6R5Q|1|K|C|927
6R5Q|1|K|G|928
6R5Q|1|K|G|929
6R5Q|1|K|C|930
6R5Q|1|K|C|931
*
6R5Q|1|K|G|1010
6R5Q|1|K|A|1011
6R5Q|1|K|A|1012
6R5Q|1|K|U|1013
6R5Q|1|K|G|1014
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain JJ
- 40S ribosomal protein S27
- Chain QQ
- ribosomal protein uS15
- Chain c
- eL30
- Chain u
- 40S ribosomal protein S3a
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