IL_6R6G_025
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGUC*GC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_025 not in the Motif Atlas
- Geometric match to IL_7V9E_001
- Geometric discrepancy: 0.2163
- The information below is about IL_7V9E_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
6R6G|1|5|G|477
6R6G|1|5|G|478
6R6G|1|5|U|479
6R6G|1|5|C|480
*
6R6G|1|5|G|547
6R6G|1|5|C|548
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain r
- eL28
Coloring options: