IL_6R6G_037

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

6R6G|1|5|G|625, 6R6G|1|5|C|650

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|G|622
6R6G|1|5|A|623
6R6G|1|5|A|624
6R6G|1|5|G|625
6R6G|1|5|G|626
6R6G|1|5|U|627
6R6G|1|5|G|628
6R6G|1|5|G|629
6R6G|1|5|C|630
*
6R6G|1|5|G|644
6R6G|1|5|U|645
6R6G|1|5|G|646
6R6G|1|5|U|647
6R6G|1|5|U|648
6R6G|1|5|A|649
6R6G|1|5|C|650
6R6G|1|5|A|651
6R6G|1|5|G|652
6R6G|1|5|C|653

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

Ribosomal protein L14

Chain S

eL20