IL_6R6G_038
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCU*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_038 not in the Motif Atlas
- Geometric match to IL_7A0S_031
- Geometric discrepancy: 0.232
- The information below is about IL_7A0S_031
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
6R6G|1|5|U|718
6R6G|1|5|C|719
6R6G|1|5|U|720
*
6R6G|1|5|G|834
6R6G|1|5|A|835
6R6G|1|5|G|836
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain b
- eL29
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