3D structure

PDB id
6R6G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of XBP1u-paused ribosome nascent chain complex with SRP.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CUCCG*CG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6R6G|1|5|C|1254
6R6G|1|5|U|1255
6R6G|1|5|C|1256
6R6G|1|5|C|1257
6R6G|1|5|G|1258
*
6R6G|1|5|C|1378
6R6G|1|5|G|1379

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain F
uL30
Chain Q
eL18
Chain T
eL21
Chain b
eL29

Coloring options:

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