IL_6R6G_120
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GA*UACC
- Length
- 6 nucleotides
- Bulged bases
- 6R6G|1|5|A|2955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_120 not in the Motif Atlas
- Homologous match to IL_5TBW_094
- Geometric discrepancy: 0.1404
- The information below is about IL_5TBW_094
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
6R6G|1|5|G|2614
6R6G|1|5|A|2615
*
6R6G|1|5|U|2954
6R6G|1|5|A|2955
6R6G|1|5|C|2956
6R6G|1|5|C|2957
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- X-box-binding protein 1
- Chain 2
- Transfer RNA; tRNA
- Chain A
- uL2
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