IL_6R6G_136
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CU*AACG
- Length
- 6 nucleotides
- Bulged bases
- 6R6G|1|5|A|3088, 6R6G|1|5|C|3089
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_136 not in the Motif Atlas
- Homologous match to IL_8C3A_117
- Geometric discrepancy: 0.1203
- The information below is about IL_8C3A_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24807.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6R6G|1|5|C|3028
6R6G|1|5|U|3029
*
6R6G|1|5|A|3087
6R6G|1|5|A|3088
6R6G|1|5|C|3089
6R6G|1|5|G|3090
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain O
- 60S ribosomal protein L13a
- Chain V
- eL14
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