IL_6R6G_151

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGAGCC*GGAACCUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|C|3304
6R6G|1|5|G|3305
6R6G|1|5|G|3306
6R6G|1|5|A|3307
6R6G|1|5|G|3308
6R6G|1|5|C|3309
6R6G|1|5|C|3310
*
6R6G|1|5|G|3433
6R6G|1|5|G|3434
6R6G|1|5|A|3435
6R6G|1|5|A|3436
6R6G|1|5|C|3437
6R6G|1|5|C|3438
6R6G|1|5|U|3439
6R6G|1|5|G|3440

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain f

eL33