IL_6R6G_161

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

6R6G|1|5|G|3516

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|U|3483
6R6G|1|5|C|3484
6R6G|1|5|G|3485
6R6G|1|5|U|3486
6R6G|1|5|A|3487
6R6G|1|5|C|3488
6R6G|1|5|G|3489
*
6R6G|1|5|U|3514
6R6G|1|5|U|3515
6R6G|1|5|G|3516
6R6G|1|5|A|3517
6R6G|1|5|A|3518
6R6G|1|5|A|3519

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain W

Ribosomal protein L24

Chain d

eL31