IL_6R6G_175

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUAAGUUC*GAUCAGUAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|AF|C|116
6R6G|1|AF|U|117
6R6G|1|AF|A|118||A
6R6G|1|AF|A|119||A
6R6G|1|AF|G|120
6R6G|1|AF|U|121
6R6G|1|AF|U|122
6R6G|1|AF|C|123
*
6R6G|1|AF|G|227
6R6G|1|AF|A|228
6R6G|1|AF|U|229
6R6G|1|AF|C|230||A
6R6G|1|AF|A|231||A
6R6G|1|AF|G|232||A
6R6G|1|AF|U|233||A
6R6G|1|AF|A|234
6R6G|1|AF|G|235

Current chains

Chain AF

7S RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain AI

Signal recognition particle subunit SRP68