IL_6R6G_179

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAACCG*CAAAA

Length

12 nucleotides

Bulged bases

6R6G|1|AF|C|185

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|AF|U|181
6R6G|1|AF|G|182
6R6G|1|AF|A|183
6R6G|1|AF|A|184
6R6G|1|AF|C|185
6R6G|1|AF|C|186
6R6G|1|AF|G|187
*
6R6G|1|AF|C|212
6R6G|1|AF|A|213
6R6G|1|AF|A|214
6R6G|1|AF|A|215
6R6G|1|AF|A|216

Current chains

Chain AF

7S RNA

Nearby chains

Chain AB

Signal recognition particle 54 kDa protein

Chain AC

Signal recognition particle subunit SRP19