IL_6R6G_195
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUGAC*GGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_195 not in the Motif Atlas
- Geometric match to IL_5J7L_338
- Geometric discrepancy: 0.2386
- The information below is about IL_5J7L_338
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6R6G|1|K|C|188
6R6G|1|K|U|189
6R6G|1|K|G|190
6R6G|1|K|A|191
6R6G|1|K|C|192
*
6R6G|1|K|G|207
6R6G|1|K|G|208
6R6G|1|K|A|209
6R6G|1|K|U|210
6R6G|1|K|G|211
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain CC
- 40S ribosomal protein S8
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