IL_6R6G_205
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUA*UA
- Length
- 5 nucleotides
- Bulged bases
- 6R6G|1|K|U|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_205 not in the Motif Atlas
- Geometric match to IL_5J7L_017
- Geometric discrepancy: 0.1687
- The information below is about IL_5J7L_017
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
6R6G|1|K|U|487
6R6G|1|K|U|488
6R6G|1|K|A|489
*
6R6G|1|K|U|511
6R6G|1|K|A|512
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain AD
- Signal recognition particle 9 kDa protein
- Chain AE
- Signal recognition particle 14 kDa protein
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain NN
- 40S ribosomal protein S24
- Chain x
- 40S ribosomal protein S4
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