IL_6R6G_225
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGC*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_225 not in the Motif Atlas
- Geometric match to IL_4LFB_059
- Geometric discrepancy: 0.2937
- The information below is about IL_4LFB_059
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
6R6G|1|K|C|877
6R6G|1|K|G|878
6R6G|1|K|C|879
*
6R6G|1|K|G|907
6R6G|1|K|A|908
6R6G|1|K|G|909
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19
Coloring options: