IL_6R6G_291

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGCCAU*AGGCGGA

Length

13 nucleotides

Bulged bases

6R6G|1|5|C|3290

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|U|3150
6R6G|1|5|G|3151
6R6G|1|5|C|3152
6R6G|1|5|C|3153
6R6G|1|5|A|3154
6R6G|1|5|U|3155
*
6R6G|1|5|A|3287
6R6G|1|5|G|3288
6R6G|1|5|G|3289
6R6G|1|5|C|3290
6R6G|1|5|G|3291
6R6G|1|5|G|3292
6R6G|1|5|A|3293

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain O

60S ribosomal protein L13a