IL_6R6P_035

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUGGG*CGC

Length

9 nucleotides

Bulged bases

6R6P|1|5|U|728, 6R6P|1|5|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|5|G|726
6R6P|1|5|C|727
6R6P|1|5|U|728
6R6P|1|5|G|729
6R6P|1|5|G|730
6R6P|1|5|G|731
*
6R6P|1|5|C|938
6R6P|1|5|G|939
6R6P|1|5|C|940

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain F

uL30

Chain M

Ribosomal protein L14

Chain S

eL20