IL_6R6P_081

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCC*GGAAUC

Length

12 nucleotides

Bulged bases

6R6P|1|5|G|1975

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|5|G|1973
6R6P|1|5|U|1974
6R6P|1|5|G|1975
6R6P|1|5|G|1976
6R6P|1|5|C|1977
6R6P|1|5|C|1978
*
6R6P|1|5|G|1988
6R6P|1|5|G|1989
6R6P|1|5|A|1990
6R6P|1|5|A|1991
6R6P|1|5|U|1992
6R6P|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein L10 (Predicted)

Chain s

60S acidic ribosomal protein P0

Chain t

Ribosomal protein L12