IL_6R6P_108

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGUC*GCGCCUAGC

Length

14 nucleotides

Bulged bases

6R6P|1|5|C|3593, 6R6P|1|5|U|3595, 6R6P|1|5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|5|G|2901
6R6P|1|5|G|2902
6R6P|1|5|G|2903
6R6P|1|5|U|2904
6R6P|1|5|C|2905
*
6R6P|1|5|G|3590
6R6P|1|5|C|3591
6R6P|1|5|G|3592
6R6P|1|5|C|3593
6R6P|1|5|C|3594
6R6P|1|5|U|3595
6R6P|1|5|A|3596
6R6P|1|5|G|3597
6R6P|1|5|C|3598

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

eL19