IL_6R6P_135
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6P_135 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.1297
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6R6P|1|5|C|4412
6R6P|1|5|C|4413
6R6P|1|5|A|4414
6R6P|1|5|A|4415
6R6P|1|5|G|4416
*
6R6P|1|5|C|4426
6R6P|1|5|G|4427
6R6P|1|5|A|4428
6R6P|1|5|C|4429
6R6P|1|5|G|4430
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain I
- Ribosomal protein L10 (Predicted)
- Chain m
- eL40
Coloring options: