IL_6R6P_155

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUCC*GUCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|5|G|4768
6R6P|1|5|G|4769
6R6P|1|5|U|4770
6R6P|1|5|C|4771
6R6P|1|5|C|4772
*
6R6P|1|5|G|4863
6R6P|1|5|U|4864
6R6P|1|5|C|4865
6R6P|1|5|C|4866

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

uL6

Chain M

Ribosomal protein L14

Chain O

uL13