IL_6R6P_189

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

6R6P|1|K|U|305, 6R6P|1|K|G|307

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|K|C|216
6R6P|1|K|A|217
6R6P|1|K|U|218
6R6P|1|K|U|219
*
6R6P|1|K|A|302
6R6P|1|K|C|303
6R6P|1|K|C|304
6R6P|1|K|U|305
6R6P|1|K|C|306
6R6P|1|K|G|307
6R6P|1|K|G|308
6R6P|1|K|G|309

Current chains

Chain K

18S rRNA

Nearby chains

Chain CC

40S ribosomal protein S8

Chain x

40S ribosomal protein S4