IL_6R6P_259

3D structure

PDB id

6R6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAUUG*UAGAG

Length

11 nucleotides

Bulged bases

6R6P|1|K|U|1721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6P|1|K|C|1717
6R6P|1|K|G|1718
6R6P|1|K|A|1719
6R6P|1|K|U|1720
6R6P|1|K|U|1721
6R6P|1|K|G|1722
*
6R6P|1|K|U|1812
6R6P|1|K|A|1813
6R6P|1|K|G|1814
6R6P|1|K|A|1815
6R6P|1|K|G|1816

Current chains

Chain K

18S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain V

uL14

Chain VV

Ribosomal protein S23

Chain n

60s ribosomal protein l41