IL_6R6P_280
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCCA*UUAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6P_280 not in the Motif Atlas
- Geometric match to IL_8GLP_204
- Geometric discrepancy: 0.3665
- The information below is about IL_8GLP_204
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.5
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6R6P|1|K|G|565
6R6P|1|K|U|566
6R6P|1|K|C|567
6R6P|1|K|C|568
6R6P|1|K|A|569
*
6R6P|1|K|U|581
6R6P|1|K|U|582
6R6P|1|K|A|583
6R6P|1|K|A|584
6R6P|1|K|C|585
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain NN
- eS24
- Chain XX
- Ribosomal protein S9 (Predicted)
Coloring options: