IL_6R84_103

3D structure

PDB id

6R84 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGGGUGUAGAAUAA*UACCU

Length

19 nucleotides

Bulged bases

6R84|1|1|A|2458

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R84|1|1|A|2449
6R84|1|1|G|2450
6R84|1|1|G|2451
6R84|1|1|G|2452
6R84|1|1|U|2453
6R84|1|1|G|2454
6R84|1|1|U|2455
6R84|1|1|A|2456
6R84|1|1|G|2457
6R84|1|1|A|2458
6R84|1|1|A|2459
6R84|1|1|U|2460
6R84|1|1|A|2461
6R84|1|1|A|2462
*
6R84|1|1|U|2493
6R84|1|1|A|2494
6R84|1|1|C|2495
6R84|1|1|C|2496
6R84|1|1|U|2497

Current chains

Chain 1

25S rRNA

Nearby chains

Chain L

60S ribosomal protein L1-A