IL_6R84_157
3D structure
- PDB id
- 6R84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R84_157 not in the Motif Atlas
- Homologous match to IL_8C3A_484
- Geometric discrepancy: 0.115
- The information below is about IL_8C3A_484
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.2
- Basepair signature
- cWW-cWW-L-cWW-L-R-L-R-L-L
- Number of instances in this motif group
- 3
Unit IDs
6R84|1|1|G|1898
6R84|1|1|G|1899
6R84|1|1|A|1900
6R84|1|1|A|1901
6R84|1|1|G|1902
6R84|1|1|U|1903
6R84|1|1|C|1904
6R84|1|1|G|1905
6R84|1|1|G|1906
*
6R84|1|1|C|2333
6R84|1|1|U|2334
6R84|1|1|G|2335
6R84|1|1|U|2336
6R84|1|1|C|2337
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L3
- Chain x
- 60S ribosomal protein L23-A
Coloring options: