IL_6R86_036
3D structure
- PDB id
- 6R86 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1-60S ribosomal subunit complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 6R86|1|1|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R86_036 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.1594
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
6R86|1|1|A|983
6R86|1|1|G|984
6R86|1|1|U|985
*
6R86|1|1|A|1099
6R86|1|1|U|1100
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain J
- 60S ribosomal protein L7-A
- Chain S
- 60S ribosomal protein L18-A
- Chain V
- 60S ribosomal protein L21-A
- Chain d
- 60S ribosomal protein L29
Coloring options: