IL_6R86_087

3D structure

PDB id

6R86 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Vms1-60S ribosomal subunit complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

6R86|1|1|U|2205, 6R86|1|1|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R86|1|1|C|2204
6R86|1|1|U|2205
6R86|1|1|G|2206
6R86|1|1|A|2207
6R86|1|1|A|2208
6R86|1|1|U|2209
6R86|1|1|G|2210
*
6R86|1|1|C|2235
6R86|1|1|G|2236
6R86|1|1|C|2237
6R86|1|1|G|2238

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L2-A