IL_6R87_155

3D structure

PDB id

6R87 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCAGACGCAGCGG*CUUGUUGUAGACGG

Length

27 nucleotides

Bulged bases

6R87|1|1|C|2050

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R87|1|1|U|1970
6R87|1|1|C|1971
6R87|1|1|A|1972
6R87|1|1|G|1973
6R87|1|1|A|1974
6R87|1|1|C|1975
6R87|1|1|G|1976
6R87|1|1|C|1977
6R87|1|1|A|1978
6R87|1|1|G|1979
6R87|1|1|C|1980
6R87|1|1|G|1981
6R87|1|1|G|1982
*
6R87|1|1|C|2039
6R87|1|1|U|2040
6R87|1|1|U|2041
6R87|1|1|G|2042
6R87|1|1|U|2043
6R87|1|1|U|2044
6R87|1|1|G|2045
6R87|1|1|U|2046
6R87|1|1|A|2047
6R87|1|1|G|2048
6R87|1|1|A|2049
6R87|1|1|C|2050
6R87|1|1|G|2051
6R87|1|1|G|2052

Current chains

Chain 1

25S rRNA

Nearby chains

Chain b

60S ribosomal protein L27-A