IL_6R87_156

3D structure

PDB id

6R87 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GACUG*CGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R87|1|1|G|1994
6R87|1|1|A|1995
6R87|1|1|C|1996
6R87|1|1|U|1997
6R87|1|1|G|1998
*
6R87|1|1|C|2023
6R87|1|1|G|2024
6R87|1|1|G|2025
6R87|1|1|A|2026
6R87|1|1|C|2027

Current chains

Chain 1

25S rRNA

Nearby chains

Chain i

60S ribosomal protein L34-A