IL_6R87_165
3D structure
- PDB id
- 6R87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GACAUAGAGGGUGUAGAAUAA*UACCUUUAUAGU
- Length
- 33 nucleotides
- Bulged bases
- 6R87|1|1|A|2458, 6R87|1|1|U|2499
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R87|1|1|G|2442
6R87|1|1|A|2443
6R87|1|1|C|2444
6R87|1|1|A|2445
6R87|1|1|U|2446
6R87|1|1|A|2447
6R87|1|1|G|2448
6R87|1|1|A|2449
6R87|1|1|G|2450
6R87|1|1|G|2451
6R87|1|1|G|2452
6R87|1|1|U|2453
6R87|1|1|G|2454
6R87|1|1|U|2455
6R87|1|1|A|2456
6R87|1|1|G|2457
6R87|1|1|A|2458
6R87|1|1|A|2459
6R87|1|1|U|2460
6R87|1|1|A|2461
6R87|1|1|A|2462
*
6R87|1|1|U|2493
6R87|1|1|A|2494
6R87|1|1|C|2495
6R87|1|1|C|2496
6R87|1|1|U|2497
6R87|1|1|U|2498
6R87|1|1|U|2499
6R87|1|1|A|2500
6R87|1|1|U|2501
6R87|1|1|A|2502
6R87|1|1|G|2503
6R87|1|1|U|2504
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L8-A
- Chain L
- 60S ribosomal protein L1-A
- Chain k
- 60S ribosomal protein L36-A
- Chain p
- 60S ribosomal protein L15-A
Coloring options: