IL_6RBD_036

3D structure

PDB id

6RBD (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RBD|1|2|G|652
6RBD|1|2|C|653
6RBD|1|2|C|654
6RBD|1|2|G|655
6RBD|1|2|G|656
6RBD|1|2|U|657
6RBD|1|2|C|658
*
6RBD|1|2|G|676
6RBD|1|2|G|677
6RBD|1|2|A|678
6RBD|1|2|U|679
6RBD|1|2|U|680
6RBD|1|2|U|681
6RBD|1|2|C|682

Current chains

Chain 2

20S ribosomal RNA

Nearby chains